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Computer Science & 
Engineering Department 
371 Fairfield Road 
Unit 2155 
Storrs, CT 06269-2155 
Phone: (860) 486-3719 
Fax: (860) 486-4817 



Colloquia, Seminars and Conference News

Title : DNA Topology

Date : April 23, 2007. (4:00 pm) Tea starts half an hour before each seminar

Location: ITEB 336

Speaker : Prof. De Witt Sumners

Abstract:

Cellular DNA is a long, thread-like molecule with remarkably complex topology. Enzymes that manipulate the geometry and topology of cellular DNA perform many important cellular processes (including segregation of daughter chromosomes, gene regulation, DNA repair, and generation of antibody diversity). Some enzymes pass DNA through itself via enzyme-bridged transient breaks in the DNA; other enzymes break the DNA apart and reconnect it to different ends. In the topological approach to enzymology, circular DNA is incubated with an enzyme, producing an enzyme signature in the form of DNA knots and links. By observing the changes in DNA geometry (supercoiling) and topology (knotting and linking) due to enzyme action, the enzyme binding and mechanism can often be characterized. This talk will discuss topological models for DNA strand passage and exchange, introducing the tangle model for analysis of DNA site-specific recombination experiments.

Bio:

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